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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. MAGT1, magnesium transporter 1
Sequence ID:NM_032121
RefSeqGene ID:NG_016390
Entrez Gene ID:84061
Ensembl ID:ENSG00000102158

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 77081860 - 77082770

NM_032121 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1728857708186377084731
288629767708630177086391
297730517709674277096816
305231157710939777109460
311632057711099777111086
320633467711222977112369
334734877711285377112993
348836057712630477126421
360637757713092477131093
377640357715080577151064

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3834858Full LengthBC041014magnesium transporter 1
30338916Full LengthBC060842magnesium transporter 1
3932289IncompleteBC016342implantation-associated protein
4515677IncompleteBC018447implantation-associated protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115497  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032121 NP_115497 Q9H0U3 OST3_OST6

Related Sequences

 
mRNAGenPeptSwissProt
AF130104 AAG35529 Q9H375
BC041014 AAH41014 Q9H0U3
BC060842 AAH60842 Q9H0U3
BC063037 AAH63037 Q6P577
AY358691 AAQ89054 Q9H0U3
DQ000004 AAY18811 Q9H0U3
EU831726 ACE86560  
EU831642 ACE87242  
HQ448546 ADQ33025  
AK027632 BAB55249 Q96SP2
AK075394 BAC11592 Q9H0U3
AK223131 BAD96851 Q9H0U3
AK314309 BAG36961 Q9H0U3
AK294943 BAG58019 B4DH58
AK296743 BAG59327 A8MUP5
AL136636 CAB66571 Q9H0U3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MAGT1 NP_115497 R.norvegicus Magt1 116967   NP_446398 94
M.musculus Magt1 67075 Gene Info NP_001177338 90
N.crassa NCU03995 3872727   XP_956580 31
S.cerevisiae OST3 854252   NP_014728 26
S.pombe SPAPB17E12.11 3361396   NP_001018226 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)