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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ATG9A, autophagy related 9A
Sequence ID:NM_001077198
NM_024085
Entrez Gene ID:79065
Ensembl ID:ENSG00000198925

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q35Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 220084102 - 220087535

 Exon Info From UCSC:
NM_001077198
NM_024085

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5787445Full LengthBC065534ATG9 autophagy related 9 homolog A (S. cerevisiae)
3508043IncompleteBC001098ATG9 autophagy related 9 homolog A (S. cerevisiae)
4100336IncompleteBC021202ATG9 autophagy related 9 homolog A (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_076990  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001077198 NP_001070666 Q7Z3C6  
NM_024085 NP_076990   APG9

Related Sequences

 
mRNAGenPeptSwissProt
BC001098 AAH01098 Q7Z3C6
BC021202 AAH21202 Q7Z3C6
BC065534 AAH65534 Q7Z3C6
AK021732 BAB13882 Q7Z3C6
AK025822 BAB15246 Q7Z3C6
AK027448 BAB55119 Q7Z3C6
AK289755 BAF82444 A8K140
AK056595 BAG51759 B3KPP7
AK302521 BAG63795 B4DYN3
AL833865 CAD38723 Q7Z3C6
BX537984 CAD97944 Q7Z3C6
BX538192 CAD98061 Q7Z3C6
BX538198 CAD98064 Q7Z3C6
AM393801 CAL38676  
BK004018 DAA05199 Q7Z3C6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATG9A NP_001070666 M.musculus Atg9a 245860 Gene Info NP_001003917 98
R.norvegicus Atg9a 363254   NP_001014240 98
A.gambiae AgaP_AGAP001762 1281414   XP_321322 50
D.melanogaster Atg9 36821   NP_611114 45
C.elegans atg-9 178561   NP_872184 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)