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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ARPC4, Actin related protein 2/3 complex, subunit 4, 20kDa
Sequence ID:NM_001198793
NM_005718
NM_001024959
NM_001024960
NM_001198780
Entrez Gene ID:10093
Ensembl ID:ENSG00000241553

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 9834790 - 9848179

 Exon Info From UCSC:
NM_005718
NM_001024959
NM_001024960

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100016006BC152790actin related protein 2/3 complex, subunit 4, 20kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005709  NP_001020130  NP_001020131  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001024959 NP_001020130   ARPC4
NM_001024960 NP_001020131   ARPC4
NM_001198780 NP_001185709    
NM_001198793 NP_001185722    
NM_005718 NP_005709 P59998 ARPC4

Related Sequences

 
mRNAGenPeptSwissProt
AF006087 AAB64192 P59998
AF019888 AAB71548 P59998
BC012596 AAH12596 P59998
BC152790 AAI52791  
AK024110 BAB14828 Q9H7Z5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARPC4 NP_005709 M.musculus Arpc4 68089 Gene Info NP_080828 100
A.gambiae AgaP_AGAP001306 1281871   XP_321841 88
D.melanogaster Arc-p20 33864   NP_608996 83
C.elegans arx-6 175650   NP_498020 77
N.crassa NCU01918 3881642   XP_965549 73
S.cerevisiae ARC19 853856   NP_012912 69
S.pombe arc4 2541767   NP_594116 68
A.thaliana ARPC4 3770404   NP_001031632 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)