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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. B4GALT3, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3
Sequence ID:NM_001199873
NM_001199874
NM_003779
RefSeqGene ID:NG_011480
Entrez Gene ID:8703
Ensembl ID:ENSG00000158850

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21-q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 161141599 - 161145855

Transcript StartTranscript EndChromosomal Start Chromosomal End
1779161141100161141878
780884161142016161142120
8851007161143394161143516
10081198161143648161143838
11991434161144782161145017
14351701161145597161145863
17021847161146223161146368
18481949161147212161147313

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3357342Full LengthBC000276UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3
3677118Full LengthBC006099UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3
4124756Full LengthBC009985UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003770  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001199873 NP_001186802      
NM_001199874 NP_001186803      
NM_003779 NP_003770 O60512 EC 2.4.1.38
EC 2.4.1.90
Galactosyl_T_2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF038661 AAC39734 O60512 EC 2.4.1.38
EC 2.4.1.90
BC000276 AAH00276 O60512 EC 2.4.1.38
EC 2.4.1.90
BC006099 AAH06099 O60512 EC 2.4.1.38
EC 2.4.1.90
BC009985 AAH09985 O60512 EC 2.4.1.38
EC 2.4.1.90
DQ892494 ABM83420    
DQ895706 ABM86632    
AB024435 BAA75820 O60512 EC 2.4.1.38
EC 2.4.1.90
AK023311 BAB14520 O60512 EC 2.4.1.38
EC 2.4.1.90
AK291455 BAF84144 A8K5Z0  
AK056851 BAG51816 B3KPV4  
AK092493 BAG52558 B3KRZ6  
Y12509 CAA73111 O60512 EC 2.4.1.38
EC 2.4.1.90

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens B4GALT3 NP_001186802 R.norvegicus B4galt3 494342   NP_001009539 97
M.musculus B4galt3 57370 Gene Info NP_065604 97
C.elegans bre-4 190668   NP_490872 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)