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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. NASP, nuclear autoantigenic sperm protein (histone-binding)
Sequence ID:NM_001195193
NM_002482
NM_152298
NM_172164
RefSeqGene ID:NG_029224
Entrez Gene ID:4678
Ensembl ID:ENSG00000132780

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p34.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 46049734 - 46081070

 Exon Info From UCSC:
NM_002482
NM_152298
NM_172164

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3504220Full LengthBC003113nuclear autoantigenic sperm protein (histone-binding)
3538429Full LengthBC010105nuclear autoantigenic sperm protein (histone-binding)
4558913Full LengthBC011580nuclear autoantigenic sperm protein (histone-binding)
6013263Full LengthBC053608nuclear autoantigenic sperm protein (histone-binding)
3959857IncompleteBC009933nuclear autoantigenic sperm protein (histone-binding)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689511  NP_002473  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001195193 NP_001182122    
NM_002482 NP_002473 P49321 TPR_1
NM_152298 NP_689511 Q5T626 TPR_1

Related Sequences

 
mRNAGenPeptSwissProt
M97856 AAA36027 P49321
AF035191 AAD02006 O95138
BC003113 AAH03113 Q5T626
P49321
BC009933 AAH09933 Q6PJY7
BC010105 AAH10105 P49321
BC011580 AAH11580 P49321
BC053608 AAH53608 Q5T626
P49321
BT006757 AAP35403 Q5T626
DQ893275 ABM84201  
DQ896606 ABM87605  
AK222778 BAD96498 Q53H03
AK222816 BAD96536 P49321
AK291637 BAF84326 P49321
AK298893 BAG61005 B4DQP3
AK299584 BAG61519 B4DS57

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NASP NP_002473 M.musculus Nasp 50927 Gene Info NP_058057 83
R.norvegicus Nasp 298441   NP_001005543 82
S.pombe sim3 2540895   NP_595313 30
C.elegans nasp-1 174697   NP_496380 30
N.crassa NCU04238 3877377   XP_961229 28
C.elegans nasp-2 179810   NP_506298 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)