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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PTPRJ, Protein tyrosine phosphatase, receptor type, J
Sequence ID:NM_002843
NM_001098503
RefSeqGene ID:NG_012209
Entrez Gene ID:5795
Ensembl ID:ENSG00000149177

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
COLON CANCERAKT1
APC
APC
AURKA
AXIN2
BCL10
BUB1B
CCND1
EP300
FGFR3
FLCN
MLH3
NRAS
ODC1
PDGFRL
PIK3CA
PIK3CA
PLA2G2A
SMAD7
TLR2
TLR4
TP53
TP53

Cytogenetic Location (from UniGene)

Cytogenetic Location:11p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 48157242 - 48161324

 Exon Info From UCSC:
NM_002843
NM_001098503

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100064157Full LengthBC160125protein tyrosine phosphatase, receptor type, J

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002834  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001098503 NP_001091973      
NM_002843 NP_002834 Q12913 EC 3.1.3.48 fn3
Y_phosphatase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U10886 AAB36687 Q12913 EC 3.1.3.48
BC063417 AAH63417 Q12913 EC 3.1.3.48
BC160125 AAI60125 Q12913 EC 3.1.3.48
D37781 BAA07035 Q12913 EC 3.1.3.48
AL359057 CAB94390 Q9NPR5  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PTPRJ NP_002834 R.norvegicus Ptprj 29645   NP_058965 74
M.musculus Ptprj 19271 Gene Info NP_033008 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)