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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CDH18, cadherin 18, type 2
Sequence ID:NM_001167667
NM_004934
Entrez Gene ID:1016
Ensembl ID:ENSG00000145526

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5p14.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 19473156 - 20575982

 Exon Info From UCSC:
NM_001167667
NM_004934

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5278717Full LengthBC031051cadherin 18, type 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004925  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001167667 NP_001161139    
NM_004934 NP_004925 Q13634 Cadherin
Cadherin_C

Related Sequences

 
mRNAGenPeptSwissProt
U59325 AAB02933 Q13634
BC031051 AAH31051 Q13634
DQ893551 ABM84477  
DQ893936 ABM84862  
AK289547 BAF82236 Q13634
AK295087 BAG58128 Q13634

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDH18 NP_004925 M.musculus Cdh18 320865 Gene Info NP_001074768 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)