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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TEFM, transcription elongation factor, mitochondrial
Sequence ID:NM_024683
Entrez Gene ID:79736
Ensembl ID:ENSG00000172171

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Unknown

Chromosomal Position (from UCSC)

Chromosomal Position:17: 29226003 - 29226577

NM_024683 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
196422922600029226623
6437922922743029227579
79312562923108329231546
125713572923318529233285

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4184795IncompleteBC009025chromosome 17 open reading frame 42

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024683 NP_078959 Q96QE5  

Related Sequences

 
mRNAGenPeptSwissProt
BC009025 AAH09025 Q96QE5
BC073169 AAH73169 Q96QE5
AK026382 BAB15468 Q96QE5
AK298495 BAG60703 B4DPU1
AJ314645 CAC44534 Q96QE5
CR457360 CAG33641 Q96QE5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TEFM NP_078959 R.norvegicus RGD1306595 287554   NP_001020797 69
M.musculus 1110002N22Rik 68550 Gene Info NP_899098 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)