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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARID2, AT rich interactive domain 2 (ARID, RFX-like)
Sequence ID:NM_152641
Entrez Gene ID:196528
Ensembl ID:ENSG00000189079

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 46244993 - 46301819

 Exon Info From UCSC:
NM_152641

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069155Full LengthBC172461AT rich interactive domain 2 (ARID, RFX-like)
4105114IncompleteBC018661AT rich interactive domain 2 (ARID, RFX-like)
4536689IncompleteBC090062AT rich interactive domain 2 (ARID, RFX-like)
5267343IncompleteBC038726AT rich interactive domain 2 (ARID, RFX-like)
5744066IncompleteBC064625AT rich interactive domain 2 (ARID, RFX-like)
100061612BC156211AT rich interactive domain 2 (ARID, RFX-like)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689854  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_152641 NP_689854 Q68CP9 ARID

Related Sequences

 
mRNAGenPeptSwissProt
BC018661 AAH18661 Q8WV72
BC038726 AAH38726 Q4G0S8
BC090062 AAH90062 Q68CP9
BC156211 AAI56212  
BC172461 AAI72461  
AY727870 AAU20329 Q68CP9
DQ096628 AAZ74794 Q68CP9
AB046777 BAB13383 Q68CP9
AK027617 BAB55236 Q96SQ4
AK027718 BAB55320 Q68CP9
AK075385 BAC11585 Q8NBP1
AK127872 BAC87171 Q68CP9
AL832200 CAD91164 Q68CP9
BX537879 CAD97878 Q68CP9
CR749833 CAH18689 Q68CP9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARID2 NP_689854 M.musculus Arid2 77044 Gene Info NP_780460 92
R.norvegicus Arid2 366980   XP_345868 91
A.gambiae AgaP_AGAP006990 1270109   XP_001688081 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)