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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PCGF1, polycomb group ring finger 1
Sequence ID:NM_032673
Entrez Gene ID:84759
Ensembl ID:ENSG00000115289

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 74732169 - 74734499

NM_032673 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
421817473217774732316
1822627473246574732545
2633497473267874732764
3503837473286374732896
3844897473307874733183
4905617473330774733378
5627147473385874734010
7158207473416874734273
8219397473470274734820

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3621400Full LengthBC004952polycomb group ring finger 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_116062  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032673 NP_116062 Q9BSM1 zf-C3HC4

Related Sequences

 
mRNAGenPeptSwissProt
BC004952 AAH04952 Q9BSM1
AF087884 AAP97183 Q9BSM1
HQ447406 ADQ31892  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PCGF1 NP_116062 M.musculus Pcgf1 69837 Gene Info NP_932109 98
R.norvegicus Pcgf1 312480   NP_001007001 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)