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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLDN11, claudin 11
Sequence ID:NM_001185056
NM_005602
Entrez Gene ID:5010
Ensembl ID:ENSG00000013297

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q26.2-q26.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 170151372 - 170151887

 Exon Info From UCSC:
NM_001185056
NM_005602

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3895040Full LengthBC013577claudin 11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005593  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001185056 NP_001171985    
NM_005602 NP_005593 O75508 PMP22_Claudin

Related Sequences

 
mRNAGenPeptSwissProt
BC013577 AAH13577 O75508
BT019402 AAV38209 O75508
BT019403 AAV38210 O75508
DQ890980 ABM81906  
DQ894153 ABM85079  
AK312923 BAG35768 O75508
AK294087 BAG57428 B4DFG7
AJ245901 CAB55487 O75508

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLDN11 NP_005593 M.musculus Cldn11 18417 Gene Info NP_032796 94
R.norvegicus Cldn11 84588   NP_445909 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)