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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SPP1, secreted phosphoprotein 1
Sequence ID:NM_000582
NM_001040058
NM_001040060
NM_001251829
NM_001251830
RefSeqGene ID:NG_030362
Entrez Gene ID:6696
Ensembl ID:ENSG00000118785

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 88902881 - 88902950

 Exon Info From UCSC:
NM_000582
NM_001040058
NM_001040060

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3828885Full LengthBC017387secreted phosphoprotein 1
4052438Full LengthBC007016secreted phosphoprotein 1
4284921Full LengthBC022844secreted phosphoprotein 1
5288027Full LengthBC093033secreted phosphoprotein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000573  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000582 NP_000573   Osteopontin
NM_001040058 NP_001035147 P10451  
NM_001040060 NP_001035149    
NM_001251829 NP_001238758    
NM_001251830 NP_001238759    

Related Sequences

 
mRNAGenPeptSwissProt
M83248 AAA17675 P10451
J04765 AAA59974 P10451
AF052124 AAC28619 P10451
BC007016 AAH07016 P10451
BC017387 AAH17387 P10451
BC022844 AAH22844 P10451
BC093033 AAH93033 P10451
AY956318 AAX59003  
DQ839491 ABI63352 P10451
DQ846870 ABI63357 A6XMV6
DQ846871 ABI63358 P10451
DQ892544 ABM83470  
DQ895755 ABM86681  
EU832035 ACE86697  
EU831940 ACE87381  
HQ874460 AEA49027 F2YBS4
HQ874461 AEA49028 F2YBS5
JF412666 AEA49030 F2YQ21
JF412667 AEA49031 P10451
D28759 BAA05949 P10451
D28760 BAA05950 P10451
D28761 BAA05951 P10451
AK075463 BAC11635 P10451
AB209987 BAE45628 Q3LGB0
AK290090 BAF82779 P10451
AK290104 BAF82793 P10451
AK315461 BAG37848 P10451
AK296035 BAG58801 P10451
AK295491 BAH12087 B7Z351
AB469789 BAH58215 C4B6Q2
X13694 CAA31984 P10451
AM392768 CAL37646  
AM392898 CAL37776  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SPP1 NP_001035149 M.musculus Spp1 20750 Gene Info NP_033289 68
R.norvegicus LOC100359743 100359743   XP_002728123 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta