Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CSDC2, Cold shock domain containing C2, RNA binding
Sequence ID:NM_014460
Entrez Gene ID:27254
Ensembl ID:ENSG00000172346

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 41967949 - 41971575

NM_014460 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11744195701341957186
1754734196784641968144
4745964196965841969780
59725304197073641972669

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5759182Full LengthBC067113cold shock domain containing C2, RNA binding

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055275  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014460 NP_055275 Q9Y534 CSD

Related Sequences

 
mRNAGenPeptSwissProt
U79280 AAB50218 Q99779
BC067113 AAH67113 Q9Y534
EU831999 ACE86662  
EU831905 ACE87346  
AB027011 BAA84704 Q9Y534
AK313407 BAG36202 B2R8K5
AL834417 CAD39079 Q9Y534
CR456457 CAG30343 Q9Y534
CU013007 CAK54438  
CU013295 CAK54737  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CSDC2 NP_055275 R.norvegicus Csdc2 266600   XP_345861 98
M.musculus Csdc2 105859 Gene Info NP_663448 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)