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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TTC21B, tetratricopeptide repeat domain 21B
Sequence ID:NM_024753
RefSeqGene ID:NG_030345
Entrez Gene ID:79809
Ensembl ID:ENSG00000123607

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 166785229 - 166810255

 Exon Info From UCSC:
NM_024753

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4837489Full LengthBC055424tetratricopeptide repeat domain 21B
4357717IncompleteBC063579tetratricopeptide repeat domain 21B
5586441IncompleteBC035767tetratricopeptide repeat domain 21B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079029  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024753 NP_079029 Q7Z4L5 TPR_1
TPR_2

Related Sequences

 
mRNAGenPeptSwissProt
BC035767 AAH35767 Q7Z4L5
BC055424 AAH55424 Q7Z4L5
BC063579 AAH63579 Q7Z4L5
AK057268 BAB71404 Q7Z4L5
AB073395 BAE45724 Q7Z4L5
AK292942 BAF85631 A8KA77
AK096451 BAG53294 B3KU32

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TTC21B NP_079029 R.norvegicus Ttc21b 295654   XP_229983 86
M.musculus Ttc21b 73668 Gene Info NP_001041069 86
A.gambiae AgaP_AGAP000136 1272132   XP_311010 41
C.elegans ZK328.7 175855   NP_001022993 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)