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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TBCB, tubulin folding cofactor B
Sequence ID:NM_001281
Entrez Gene ID:1155
Ensembl ID:ENSG00000105254

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.11-q13.12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 36606396 - 36616843

NM_001281 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16893660588736606575
6908333660694236607085
8349303661161136611707
93111223661242836612619
112311953661635236616424
119614753661656936616848

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4076810Full LengthBC005969tubulin folding cofactor B
6527446Full LengthBC052812tubulin folding cofactor B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001272  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001281 NP_001272 Q99426 CAP_GLY

Related Sequences

 
mRNAGenPeptSwissProt
AF013488 AAB67716 Q99426
BC005969 AAH05969 Q99426
BC052812 AAH52812 Q99426
BT007424 AAP36092 Q99426
DQ892900 ABM83826  
DQ896150 ABM87149  
D49738 BAA08572 Q99426
Q6FGY5
CR541971 CAG46769 Q6FGY5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TBCB NP_001272 R.norvegicus Tbcb 292777   NP_001035270 90
M.musculus Tbcb 66411 Gene Info NP_079824 89
A.gambiae AgaP_AGAP000120 1272147   XP_311025 50
D.melanogaster CG11242 37244   NP_611425 46
C.elegans F53F4.3 186176   NP_506367 45
A.thaliana AT3G10220 820184   NP_187633 41
N.crassa NCU01713 3872174   XP_956027 37
S.pombe alp11 2542814   NP_593683 35
S.cerevisiae ALF1 855574   NP_014251 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)