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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CCL25, chemokine (C-C motif) ligand 25
Sequence ID:NM_001201359
NM_005624
NM_148888
Entrez Gene ID:6370
Ensembl ID:ENSG00000131142

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 8117933 - 8122748

Transcript StartTranscript EndChromosomal Start Chromosomal End
17381179338118005
7419181210358121152
19232581212498121382
32644581226848122803
44689081271018127545

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9052989Full LengthBC144463chemokine (C-C motif) ligand 25
40119547Full LengthBC125136chemokine (C-C motif) ligand 25
40146592Full LengthBC130561chemokine (C-C motif) ligand 25

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005615  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001201359 NP_001188288    
NM_005624 NP_005615 O15444 IL8

Related Sequences

 
mRNAGenPeptSwissProt
U86358 AAB69981 O15444
BC125136 AAI25137 Q08AK2
BC130561 AAI30562 O15444
BC144463 AAI44464 O15444
HQ258070 ADR82824  
AB046579 BAB62257 O15444
AK292662 BAF85351 O15444

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCL25 NP_005615 M.musculus Ccl25 20300 Gene Info NP_033164 54
R.norvegicus Ccl25 360750   NP_001032280 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)