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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DNAAF1, dynein, axonemal, assembly factor 1
Sequence ID:NM_178452
RefSeqGene ID:NG_021174
Entrez Gene ID:123872
Ensembl ID:ENSG00000154099

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q24.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 84188391 - 84211522

 Exon Info From UCSC:
NM_178452

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4822973Full LengthBC024009leucine rich repeat containing 50

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848547  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178452 NP_848547 Q8NEP3 LRR_1

Related Sequences

 
mRNAGenPeptSwissProt
BC024009 AAH24009 Q8NEP3
AK057238 BAB71392 Q8NEP3
AK058059 BAB71645 Q8NEP3
AK295990 BAG58765 Q8NEP3
AL833328 CAH10390 Q8NEP3
AL833336 CAH10394 Q8NEP3
AL137334 CAH10706 Q8NEP3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DNAAF1 NP_848547 R.norvegicus Dnaaf1 361419   NP_001014176 65
M.musculus Lrrc50 68270 Gene Info NP_080924 62
P.falciparum MAL13P1.238 813797   XP_001350191 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)