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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SESTD1, SEC14 and spectrin domains 1
Sequence ID:NM_178123
Entrez Gene ID:91404
Ensembl ID:ENSG00000187231

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, soft tissue, stem cell, synovium, t-cell, testis, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q31.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 179967006 - 179969211

 Exon Info From UCSC:
NM_178123

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4815542Full LengthBC047578SEC14 and spectrin domains 1
4498952IncompleteBC029744SEC14 and spectrin domains 1
5107434IncompleteBC053862SEC14 and spectrin domains 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178123 NP_835224 Q86VW0  

Related Sequences

 
mRNAGenPeptSwissProt
BC029744 AAH29744 Q86VW0
BC047578 AAH47578 Q86VW0
BC053862 AAH53862 Q7Z6D3
AY209190 AAP47744 Q86VW0
EU832219 ACE86789  
EU832125 ACE87475  
AK057944 BAB71618 Q86VW0
AK096232 BAG53235 B3KTX3
AL122046 CAB59182 Q9UFF8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SESTD1 NP_835224 M.musculus Sestd1 228071 Gene Info NP_780674 98
C.elegans F55D12.2 172558   NP_492179 28
A.gambiae AgaP_AGAP007560 1269675   XP_308320 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)