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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CELF2, CUGBP, Elav-like family member 2
Sequence ID:NM_001025077
NM_001025076
NM_001083591
NM_006561
Entrez Gene ID:10659
Ensembl ID:ENSG00000048740

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 11207076 - 11376352

 Exon Info From UCSC:
NM_001025077
NM_001025076
NM_001083591
NM_006561

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5260623Full LengthBC036391CUG triplet repeat, RNA binding protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006552  NP_001020248  NP_001020247  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001025076 NP_001020247   RRM_1
NM_001025077 NP_001020248 O95319 RRM_1
NM_001083591 NP_001077060    
NM_006561 NP_006552   RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
U69546 AAB09040 O95319
AF036956 AAD02074 O95319
AF090693 AAD13760 O95319
AF090694 AAD13761 O95319
BC036391 AAH36391 O95319
AF432906 AAL27627 O95319
AK314087 BAG36783 B2RA86
AK293164 BAG56708 B4DDE7
AK295511 BAG58428 B4DIB6
AK297313 BAG59778 B4DM66
AK297380 BAG59822 B4DMB0
AK299548 BAG61493 B4DS31
AK299983 BAG61804 B4DSZ2
AK299992 BAG61812 B4DT00
AK302681 BAG63913 B4DZ01
AK304216 BAG65088 B4DSZ2
AK316354 BAH14725 O95319

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CELF2 NP_001020248 M.musculus Celf2 14007 Gene Info NP_001103698 100
R.norvegicus Celf2 29428   NP_058893 100
D.melanogaster aret 34648   NP_723738 57
A.gambiae AgaP_AGAP009477 1271433   XP_310221 52
P.falciparum PF13_0315 814277   XP_001350299 41
A.thaliana AT1G03457 839497   NP_171845 33
A.thaliana RBP-DR1 828090   NP_567249 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)