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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SRSF7, serine/arginine-rich splicing factor 7
Sequence ID:NM_001031684
NM_001195446
NM_006276
Entrez Gene ID:6432
Ensembl ID:ENSG00000115875

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 38972274 - 38978398

Transcript StartTranscript EndChromosomal Start Chromosomal End
315893897074238972328
159016253897328538973320
162616793897383538973888
168017903897518838975298
179118653897572038975794
186620423897667038976846
204322233897715538977335
222424893897837038978635

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2901284Full LengthBC000997splicing factor, arginine/serine-rich 7, 35kDa
2967417Full LengthBC017369splicing factor, arginine/serine-rich 7, 35kDa
4251314Full LengthBC022328splicing factor, arginine/serine-rich 7, 35kDa
4276642Full LengthBC017908splicing factor, arginine/serine-rich 7, 35kDa

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001031684 NP_001026854 Q16629  
NM_001195446 NP_001182375    

Related Sequences

 
mRNAGenPeptSwissProt
L22253 AAA35495 Q16629
AF055270 AAF00003 Q9UL60
BC000997 AAH00997 Q16629
BC017369 AAH17369 Q16629
BC017908 AAH17908 Q16629
BC022328 AAH22328 Q16629
AY166860 AAN87842 Q16629
BT006745 AAP35391 Q16629
AY513287 AAT08040 Q16629
AK091425 BAC03661 Q8NB80
AK293667 BAG57113 B4DEK2
AK297161 BAG59658 B4DLU6
AB445102 BAI99737 Q16629

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SRSF7 NP_001026854 M.musculus Srsf7 225027 Gene Info NP_666195 98
A.gambiae AgaP_AGAP008303 1277682   XP_317163 63
C.elegans rsp-6 177566   NP_741446 57
D.melanogaster xl6 33967   NP_723226 50
A.thaliana RSZ33 818311   NP_850280 48
A.thaliana RSZ32 824518   NP_190918 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)