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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. AGPHD1, aminoglycoside phosphotransferase domain containing 1
Sequence ID:NM_001013619
NM_001083612
Entrez Gene ID:123688
Ensembl ID:ENSG00000188266

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 78799958 - 78820606

 Exon Info From UCSC:
NM_001013619
NM_001083612

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9052904Full LengthBC144383similar to RIKEN cDNA C630028N24 gene
40146775Full LengthBC132753similar to RIKEN cDNA C630028N24 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001013641  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001013619 NP_001013641 A2RU49 EC 2.7.1.81 APH
NM_001083612 NP_001077081      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC132753 AAI32754 A2RU49 EC 2.7.1.81
BC144383 AAI44384 A2RU49 EC 2.7.1.81
HQ258757 ADR83508    
AK126453 BAC86556 A2RU49 EC 2.7.1.81

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AGPHD1 NP_001013641 R.norvegicus Agphd1 300723   NP_001100293 83
M.musculus Agphd1 235386 Gene Info NP_796325 80
D.melanogaster CG31751 35118   NP_724122 34
A.gambiae AgaP_AGAP004612 1275920   XP_315208 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)