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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. REST, RE1-silencing transcription factor
Sequence ID:NM_001193508
NM_005612
RefSeqGene ID:NG_029447
Entrez Gene ID:5978
Ensembl ID:ENSG00000084093

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 57775127 - 57798473

 Exon Info From UCSC:
NM_001193508
NM_005612

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020480Full LengthBC136491RE1-silencing transcription factor
40146881Full LengthBC132859RE1-silencing transcription factor
4690075IncompleteBC017822RE1-silencing transcription factor
5785778IncompleteBC038985RE1-silencing transcription factor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005603  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001193508 NP_001180437    
NM_005612 NP_005603 Q13127 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
U22314 AAB17211 Q13127
U13877 AAC50114 Q13127
U13879 AAC50115 Q13127
AF228045 AAF61710  
BC017822 AAH17822 A0PJ83
BC038985 AAH38985 Q13127
BC132859 AAI32860 Q13127
BC136491 AAI36492 Q13127
AB209750 BAD92987 Q13127

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens REST NP_005603 M.musculus Rest 19712 Gene Info NP_035393 71
R.norvegicus Rest 83618   NP_113976 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)