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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LDHAL6B, lactate dehydrogenase A-like 6B
Sequence ID:NM_033195
RefSeqGene ID:NG_031999
Entrez Gene ID:92483
Ensembl ID:ENSG00000171989

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 59499084 - 59500707

NM_033195 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
116665949904159500706

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4825988Full LengthBC022034lactate dehydrogenase A-like 6B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_149972  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_033195 NP_149972 Q9BYZ2 EC 1.1.1.27 Ldh_1_N
Ldh_1_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AY009108 AAG49399 Q9BYZ2 EC 1.1.1.27
BC022034 AAH22034 Q9BYZ2 EC 1.1.1.27
AY642121 AAT65080 Q9BYZ2 EC 1.1.1.27
AK058192 BAB71710 Q9BYZ2 EC 1.1.1.27

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LDHAL6B NP_149972 R.norvegicus Ldhal6b 369018   NP_899163 74
M.musculus Ldhal6b 106557 Gene Info NP_780558 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)