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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KRTAP4-11, keratin associated protein 4-11
Sequence ID:XM_003960728
XM_003960729
XM_003960730
NM_033059
Entrez Gene ID:653240
Ensembl ID:ENSG00000212721

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 39253233 - 39274612

NM_033059 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
411743927343539274605

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_149048  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_033059 NP_149048 Q9BYQ6 Keratin_B2

Related Sequences

 
mRNAGenPeptSwissProt
BC126131 AAI26132 Q9BYQ6
BC130562 AAI30563 Q9BYQ6
AJ406944 CAC27583 Q9BYQ6
XM_003960728 XP_003960777  
XM_003960729 XP_003960778  
XM_003960730 XP_003960779  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KRTAP4-11 NP_149048 R.norvegicus Krtap4-5 680218   XP_001056165 78
M.musculus Krtap4-7 76444 Gene Info NP_083889 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)