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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PTGDR, prostaglandin D2 receptor (DP)
Sequence ID:NM_000953
RefSeqGene ID:NG_012118
Entrez Gene ID:5729
Ensembl ID:ENSG00000168229

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
ASTHMA 

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 52741974 - 52743442

NM_000953 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19485273443052735377
94929415274144852743440

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5769056Full LengthBC040968prostaglandin D2 receptor (DP)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000944  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000953 NP_000944 Q13258 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
U31099 AAC50177 Q13258
BC040968 AAH40968 Q13258
EF577397 ABQ52417 Q13258

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PTGDR NP_000944 R.norvegicus Ptgdrl 63889   NP_071577 77
R.norvegicus Ptgdr 498475   NP_001128636 77
M.musculus Ptgdr 19214 Gene Info NP_032988 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)