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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GLIS1, GLIS family zinc finger 1
Sequence ID:NM_147193
Entrez Gene ID:148979
Ensembl ID:ENSG00000174332

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p32.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 53971905 - 54199877

NM_147193 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15445397190553972448
5457125397479253974959
7138915397552153975699
89210485398029753980453
104911815398630653986438
118212925399044953990559
129314545399546353995624
145523375405978054060662
233825155406577354065950
251628165419957654199876

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8069305Full LengthBC101799GLIS family zinc finger 1
8143914Full LengthBC104911GLIS family zinc finger 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_671726  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_147193 NP_671726 Q8NBF1 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
BC101799 AAI01800 Q8NBF1
BC104911 AAI04912 Q8NBF1
EU446680 ABZ92209  
AK090634 BAC03494 Q8NBF1
AK093474 BAC04178 Q8NBF1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GLIS1 NP_671726 M.musculus Glis1 230587 Gene Info NP_671754 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)