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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GCFC2, GC-rich sequence DNA-binding factor 2
Sequence ID:NM_001201334
NM_001201335
NM_003203
Entrez Gene ID:6936
Ensembl ID:ENSG00000005436

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 75891544 - 75938049


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5548897Full LengthBC064559chromosome 2 open reading frame 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003194  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001201334 NP_001188263    
NM_001201335 NP_001188264    
NM_003203 NP_003194 P16383 GCFC

Related Sequences

 
mRNAGenPeptSwissProt
BC000853 AAH00853 Q9BVX3
BC064559 AAH64559 P16383
EF158467 ABO84856 A4UHQ8
EF158468 ABO84857 A4UHQ9
EF158469 ABO84858 A4UHR0
AB026911 BAA85386  
AK097564 BAG53487 B3KUM5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GCFC2 NP_003194 R.norvegicus Gcfc2 312474   NP_001128026 72
M.musculus AW146020 330361 Gene Info NP_808552 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)