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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC25A42, solute carrier family 25, member 42
Sequence ID:NM_178526
Entrez Gene ID:284439
Ensembl ID:ENSG00000181035

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19p13.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 19221383 - 19223704

NM_178526 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11221917480219174923
1232371920689919207013
2383431921258919212694
3443691921572119215746
3705361921636919216535
5376531921707719217193
6548051921870219218853
80631321922137719223703

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4819096Full LengthBC045598solute carrier family 25, member 42
5302893IncompleteBC041973hypothetical protein MGC26694

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848621  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178526 NP_848621 Q86VD7 Mito_carr

Related Sequences

 
mRNAGenPeptSwissProt
BC045598 AAH45598 Q86VD7
AF521885 AAM81327 Q8NHH2
AK303785 BAH14051 B7Z8R5
FN356975 CAX94853 Q86VD7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC25A42 NP_848621 M.musculus Slc25a42 73095 Gene Info NP_001007571 92
R.norvegicus Slc25a42 689414   NP_001121062 92
D.melanogaster att-ORFB 2768673   NP_732519 60
D.melanogaster att-ORFA 42429   NP_650891 60
A.gambiae AgaP_AGAP000097 1272174   XP_311055 58
C.elegans F43G9.3 172656   NP_492333 56
A.thaliana AT4G26180 828724   NP_194348 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)