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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ST6GALNAC5, ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
Sequence ID:NM_030965
Entrez Gene ID:81849
Ensembl ID:ENSG00000117069

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 77529660 - 77531394

NM_030965 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11907733318577333374
1914367733418177334426
4378467750988877510297
8479547751594277516049
95520307752865977529734

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3356535Full LengthBC001201ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112227  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030965 NP_112227 Q9BVH7 Glyco_transf_29

Related Sequences

 
mRNAGenPeptSwissProt
BC001201 AAH01201 Q9BVH7
AK056241 BAB71127 Q9BVH7
AK095758 BAG53123 B3KTL1
AK295019 BAG58078 B4DHB7
AK300902 BAG62539 B4DV27
AJ507292 CAD45372 Q9BVH7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ST6GALNAC5 NP_112227 M.musculus St6galnac5 26938 Gene Info NP_036158 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)