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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MRPS6, Mitochondrial ribosomal protein S6
Sequence ID:NM_006933
NM_032476
Entrez Gene ID:64968
Ensembl ID:ENSG00000243927

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 35445877 - 35515026

 Exon Info From UCSC:
NM_006933
NM_032476

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2958115Full LengthBC004976mitochondrial ribosomal protein S6
3162515Full LengthBC000547mitochondrial ribosomal protein S6
4304420Full LengthBC010076mitochondrial ribosomal protein S6
4855355Full LengthBC051302mitochondrial ribosomal protein S6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_008864  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006933 NP_008864 P53794 SSF
NM_032476 NP_115865 P82932  

Related Sequences

 
mRNAGenPeptSwissProt
BC000547 AAH00547 P82932
BC004976 AAH04976 P82932
BC010076 AAH10076 P82932
BC051302 AAH51302 P82932
BC140349 AAI40350  
BC146536 AAI46537  
AY061855 AAL35739 P82932
HQ448691 ADQ33169  
AB049942 BAB40995 P82932
AK312084 BAG35020 P82932
AX750578 CAD99141 P53794

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MRPS6 NP_115865 M.musculus Mrps6 121022   NP_536704 86
A.gambiae AgaP_AGAP003217 3290767   XP_562993 44
D.melanogaster mRpS6 38535   NP_523925 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)