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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SAMD8, sterile alpha motif domain containing 8
Sequence ID:NM_001174156
NM_144660
Entrez Gene ID:142891
Ensembl ID:ENSG00000156671

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 76871466 - 76936449

 Exon Info From UCSC:
NM_001174156
NM_144660

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100014784Full LengthBC146556sterile alpha motif domain containing 8
4548948IncompleteBC080593sterile alpha motif domain containing 8
100014245BC140219sterile alpha motif domain containing 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_653261  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001174156 NP_001167627 Q96LT4  
NM_144660 NP_653261   SAM_1

Related Sequences

 
mRNAGenPeptSwissProt
BC080593 AAH80593 Q96LT4
BC140219 AAI40220  
BC146556 AAI46557  
AK057811 BAB71586 Q96LT4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SAMD8 NP_001167627 M.musculus Samd8 67630 Gene Info NP_080559 96
R.norvegicus Samd8 305684   NP_001012040 94
D.melanogaster SMSr 38823   NP_648114 55
A.gambiae AgaP_AGAP005884 3290068   XP_556552 54
C.elegans F53B1.2 180524   NP_508389 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)