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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BEST4, bestrophin 4
Sequence ID:NM_153274
Entrez Gene ID:266675
Ensembl ID:ENSG00000142959

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p33-p32.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 45249258 - 45253377

NM_153274 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
38994524925845250154
90010544525030045250454
105511354525057645250656
113613334525077945250976
133414114525127045251347
141215664525174545251899
156718004525213445252367
180118954525304345253137
189620964525322545253425

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8069329Full LengthBC101823bestrophin 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_695006  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_153274 NP_695006 Q8NFU0 Bestrophin

Related Sequences

 
mRNAGenPeptSwissProt
BC101823 AAI01824 Q8NFU0
AF440757 AAM76996 Q8NFU0
AY515707 AAR99657 Q8NFU0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BEST4 NP_695006 R.norvegicus LOC689103 689103   XP_001066317 86
D.melanogaster Best4 39660   NP_001097609 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)