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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC19A2, solute carrier family 19 (thiamine transporter), member 2
Sequence ID:NM_006996
RefSeqGene ID:NG_008255
Entrez Gene ID:10560
Ensembl ID:ENSG00000117479

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
THIAMINE-RESPONSIVE MEGALOBLASTIC ANEMIA SYNDROME 

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 169433168 - 169455164

NM_006996 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
222086169433150169435214
20872228169437348169437489
22292421169437881169438073
24222644169439201169439423
26453247169446392169446994
32483655169454800169455207

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3872233Full LengthBC018514solute carrier family 19 (thiamine transporter), member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_008927  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006996 NP_008927 O60779 Folate_carrier

Related Sequences

 
mRNAGenPeptSwissProt
AF153330 AAD43534 O60779
AF135488 AAD45985 O60779
AF160812 AAF15129 O60779
BC018514 AAH18514 O60779
AF272359 AAK54468 O60779
AB209540 BAD92777 Q59FC0
AK313779 BAG36517 O60779
AK304021 BAG64936 O60779
AK316465 BAH14836 O60779
AJ237724 CAB50770 O60779

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC19A2 NP_008927 M.musculus Slc19a2 116914 Gene Info NP_473428 91
R.norvegicus Slc19a2 289175   NP_001025195 91
C.elegans folt-1 179544   NP_505833 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)