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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CCR1, chemokine (C-C motif) receptor 1
Sequence ID:NM_001295
Entrez Gene ID:1230
Ensembl ID:ENSG00000163823

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 46243720 - 46249820

NM_001295 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1526304624319946245814
263126904624977246249831

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5483554Full LengthBC064991chemokine (C-C motif) receptor 1
5485097Full LengthBC051306chemokine (C-C motif) receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001286  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001295 NP_001286 P32246
Q5U003
7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
L10918 AAA36543 P32246
Q5U003
L09230 AAA58408 P32246
Q5U003
BC051306 AAH51306 P32246
Q5U003
BC064991 AAH64991 P32246
Q5U003
BT019908 AAV38711 P32246
Q5U003
BT019909 AAV38712 P32246
Q5U003
EU831549 ACE86468  
EU831462 ACE87149  
D10925 BAA01723 P32246

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCR1 NP_001286 M.musculus Ccr1 12768 Gene Info NP_034042 80
R.norvegicus Ccr1 57301   NP_065417 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta