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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TNP1, transition protein 1 (during histone to protamine replacement)
Sequence ID:NM_003284
Entrez Gene ID:7141
Ensembl ID:ENSG00000118245

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q35-q36Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 217724181 - 217724782

NM_003284 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17251217724183217724417
252415217724618217724781

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5272281Full LengthBC029516transition protein 1 (during histone to protamine replacement)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003275  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003284 NP_003275 Q4ZG82
P09430
TP1

Related Sequences

 
mRNAGenPeptSwissProt
BC029516 AAH29516 Q4ZG82
P09430
HQ448184 ADQ32665  
X07948 CAA30774 Q4ZG82
P09430

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TNP1 NP_003275 M.musculus Tnp1 21958 Gene Info NP_033433 87
R.norvegicus Tnp1 24839   NP_058752 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)