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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TERF2IP, telomeric repeat binding factor 2, interacting protein
Sequence ID:NM_018975
Entrez Gene ID:54386
Ensembl ID:ENSG00000166848

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q23.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 75681731 - 75691330

NM_018975 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18167568163475682449
8179417568817075688294
94221757569010475691337

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2820760Full LengthBC004465telomeric repeat binding factor 2, interacting protein
2820760Full LengthBC005841telomeric repeat binding factor 2, interacting protein
4253277Full LengthBC022428telomeric repeat binding factor 2, interacting protein
5760351Full LengthBC078171telomeric repeat binding factor 2, interacting protein

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018975 NP_061848 Q9NYB0  

Related Sequences

 
mRNAGenPeptSwissProt
AF262988 AAF72711 Q9NYB0
BC004465 AAH04465 Q9NYB0
BC005841 AAH05841 Q9NYB0
BC022428 AAH22428 Q9NYB0
BC078171 AAH78171 Q9NYB0
AF289599 AAL55783 Q9NYB0
AF250393 AAQ14259 Q9NYB0
HQ448265 ADQ32745  
AK000669 BAA91317 Q9NYB0
AK298535 BAG60735 B4DPX3
AK298880 BAG60996 Q9NYB0
XM_002344103 XP_002344144  
XM_002344922 XP_002344963  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TERF2IP NP_061848 M.musculus Terf2ip 57321 Gene Info NP_065609 87
R.norvegicus Terf2ip 307861   NP_001013161 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)