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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RBM3, RNA binding motif (RNP1, RRM) protein 3
Sequence ID:NM_006743
NM_001017430
NM_001017431
Entrez Gene ID:5935
Ensembl ID:ENSG00000102317

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 48432871 - 48436672

Transcript StartTranscript EndChromosomal Start Chromosomal End
11264843283548432960
1272424843355548433670
2433494843394848434054
3504554843470148434806
4565524843489548434991
5536364843541348435496
63715884843585248436803

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3449185Full LengthBC006825RNA binding motif (RNP1, RRM) protein 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006734  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006743 NP_006734 P98179 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
BC006825 AAH06825 P98179
AY203954 AAP34477 Q6XYB6
AK026664 BAB15519 Q9H5V0
AK129559 BAC85182 Q6ZPC8
AK289614 BAF82303 A8K0P9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RBM3 NP_006734 M.musculus Rbm3 19652 Gene Info NP_001159881 97
R.norvegicus Rbm3 114488   NP_446148 97
M.musculus Gm15453 100043257   XP_001480247 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)