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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SEH1L, SEH1-like (S. cerevisiae)
Sequence ID:NM_001013437
NM_031216
Entrez Gene ID:81929
Ensembl ID:ENSG00000085415

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18p11.21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 12948014 - 12987536

 Exon Info From UCSC:
NM_001013437
NM_031216

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3865994Full LengthBC012430SEH1-like (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001013455  NP_112493  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001013437 NP_001013455 Q96EE3 WD40
NM_031216 NP_112493 Q96EE3 WD40

Related Sequences

 
mRNAGenPeptSwissProt
AF136976 AAG49437 Q96EE3
BC012430 AAH12430 Q96EE3
AF255625 AAM21169 Q96EE3
AF431970 AAM44214 Q96EE3
AF514996 AAM76707 Q96EE3
HQ447878 ADQ32362  
AK056940 BAB71317 Q96EE3
AK291226 BAF83915 Q96EE3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SEH1L NP_001013455 M.musculus Seh1l 72124 Gene Info NP_001034177 96
A.gambiae AgaP_AGAP005174 1274879   XP_314068 64
D.melanogaster Nup44A 35762   NP_724638 58
C.elegans npp-18 176748   NP_499740 44
S.pombe seh1 2541682   NP_593751 43
S.cerevisiae SEH1 852778   NP_011415 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)