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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TPM2, Tropomyosin 2 (beta)
Sequence ID:NM_003289
NM_213674
RefSeqGene ID:NG_011620
Entrez Gene ID:7169
Ensembl ID:ENSG00000198467

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
ARTHROGRYPOSIS MULTIPLEX CONGENITA, DISTAL, TYPE 1 
ARTHROGRYPOSIS MULTIPLEX CONGENITA, DISTAL, TYPE 2BMYH3
TNNI2
TNNT3
NEMALINE MYOPATHY 

Cytogenetic Location (from UniGene)

Cytogenetic Location:9p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 35682006 - 35689800

 Exon Info From UCSC:
NM_003289
NM_213674

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3640927Full LengthBC011776tropomyosin 2 (beta)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003280  NP_998839  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003289 NP_003280 P07951 Tropomyosin
NM_213674 NP_998839   Tropomyosin

Related Sequences

 
mRNAGenPeptSwissProt
M12125 AAA36773 P07951
M12126 AAA61229 P07951
M74817 AAA61230 P07951
M75165 AAB59509 P07951
BC011776 AAH11776 P07951
DQ892908 ABM83834  
DQ896159 ABM87158  
EU106177 ABU62930 A7XZE4
AK223258 BAD96978 P07951
AK294522 BAG57733 B4DGC2
AK300249 BAG62015 B4DTK3
AK304803 BAG65553 B4E3P1
X06825 CAA29971 P07951

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TPM2 NP_998839 R.norvegicus Tpm2 500450   NP_001019516 99
M.musculus Tpm2 22004 Gene Info NP_033442 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)