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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TUBB2B, tubulin, beta 2B class IIb
Sequence ID:NM_178012
RefSeqGene ID:NG_016715
Entrez Gene ID:347733
Ensembl ID:ENSG00000137285

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 3224729 - 3226015

NM_178012 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2155132244953226044
1552166232263923226502
1663177132267943226902
1772201932277203227967

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2964590Full LengthBC001352tubulin, beta 2B
4941267Full LengthBC063610tubulin, beta 2B
40131580IncompleteBC127872tubulin, beta 2B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_821080  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178012 NP_821080 Q9BVA1 Tubulin
Tubulin_C

Related Sequences

 
mRNAGenPeptSwissProt
AF035316 AAB88188 O43209
BC001352 AAH01352 Q9BVA1
BC063610 AAH63610 Q9BVA1
BC127872 AAI27873 A1L195
BC127874 AAI27875 A1L196
BT019930 AAV38733 Q9BVA1
HQ447903 ADQ32387  
AK289433 BAF82122 Q9BVA1
AK297568 BAH12617 B7Z4N1
AL050056 CAB43252 Q9UGA2
CR456788 CAG33069 Q9BVA1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TUBB2B NP_821080 M.musculus Tubb2b 73710 Gene Info NP_076205 100
R.norvegicus Tubb2b 291081   NP_001013908 100
D.melanogaster betaTub85D 41124   NP_524290 96
C.elegans mec-7 181036   NP_509313 93
A.thaliana TUB6 831100   NP_196786 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)