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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARX, aristaless related homeobox
Sequence ID:NM_139058
RefSeqGene ID:NG_008281
Entrez Gene ID:170302
Ensembl ID:ENSG00000004848

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 1CDKL5
HYDRANENCEPHALY WITH ABNORMAL GENITALIA 
MENTAL RETARDATION, X-LINKED 29 AND OTHERS 
PARTINGTON SYNDROME 
PROUD SYNDROME 

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 25022789 - 25033854

NM_139058 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1412262502181425023026
122715552502522725025555
155616012502837625028421
160224782503103825031914
247928852503365825034064

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9093255IncompleteBC169333aristaless related homeobox
9093256IncompleteBC169334aristaless related homeobox

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_620689  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_139058 NP_620689 Q96QS3 Homeobox
OAR

Related Sequences

 
mRNAGenPeptSwissProt
AY038071 AAK93901 Q96QS3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARX NP_620689 R.norvegicus Arx 317268   NP_001093644 97
M.musculus Arx 11878 Gene Info NP_031518 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)