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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FAM203A, family with sequence similarity 203, member A
Sequence ID:NM_016458
Entrez Gene ID:51236
Ensembl ID:ENSG00000235173

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 145193661 - 145195616

NM_016458 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1660145192671145193330
661761145193409145193509
762860145193617145193715
861952145193911145194002
9531075145194091145194213
10762404145194290145195618

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2822563Full LengthBC003035chromosome 8 open reading frame 30A
2822563Full LengthBC009915chromosome 8 open reading frame 30A
3845929IncompleteBC015471chromosome 8 open reading frame 30A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057542  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016458 NP_057542 Q9BTY7 DUF383
DUF384

Related Sequences

 
mRNAGenPeptSwissProt
AF151022 AAF36108 Q9P0T5
BC003035 AAH03035 Q9BTY7
BC009915 AAH09915 Q9BTY7
BC015471 AAH15471 Q96BK8
AK098226 BAG53598 B3KUY6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FAM203A NP_057542 H.sapiens FAM203B 728071 Gene Info XP_001126758 100
M.musculus Fam203a 59053 Gene Info NP_067530 81
R.norvegicus Fam203a 315094   NP_001007708 80
A.gambiae AgaP_AGAP001442 1281736   XP_321688 41
D.melanogaster CG6073 43180   NP_651468 38
N.crassa NCU08324 3878687   XP_962537 34
S.cerevisiae HGH1 853099   NP_011703 32
S.pombe SPAC26F1.12c 2542675   NP_594883 32
A.thaliana AT1G14300 837991   NP_172882 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)