Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SMARCA2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
Sequence ID:NM_003070
NM_139045
RefSeqGene ID:NG_032162
Entrez Gene ID:6595
Ensembl ID:ENSG00000080503

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9p22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 2158455 - 2193621

 Exon Info From UCSC:
NM_003070
NM_139045

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5752305IncompleteBC040029SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
100061549BC156185SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003061  NP_620614  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003070 NP_003061 P51531 SNF2_N
Helicase_C
Bromodomain
HSA
TCH
NM_139045 NP_620614   SNF2_N
Helicase_C
Bromodomain
HSA
TCH

Related Sequences

 
mRNAGenPeptSwissProt
BC040029 AAH40029 Q56A76
BC156185 AAI56186  
AK094076 BAC04280 Q8N9Q1
AK296373 BAG59047 B4DK35
AK298045 BAG60343 B4DNT1
AK299683 BAG61590 B4DSC8
AK300093 BAG61895 B1ALG1
X72889 CAA51407 P51531

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SMARCA2 NP_620614 M.musculus Smarca2 67155 Gene Info NP_035546 97
R.norvegicus Smarca2 361745   NP_001004446 96
S.pombe snf21 2542638   NP_594861 51
S.cerevisiae STH1 854680   NP_012140 49
N.crassa NCU06488 3873266   XP_957128 46
S.pombe snf22 2538881   NP_588472 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)