Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CNTN4, contactin 4
Sequence ID:NM_001206955
NM_001206956
NM_175607
NM_175613
NM_175612
RefSeqGene ID:NG_012827
Entrez Gene ID:152330
Ensembl ID:ENSG00000144619

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p26.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 3081307 - 3099637

 Exon Info From UCSC:
NM_175607
NM_175613
NM_175612

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4826091Full LengthBC026119contactin 4
4342649IncompleteBC013797contactin 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_783302  NP_783200  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001206955 NP_001193884    
NM_001206956 NP_001193885    
NM_175607 NP_783200 Q8IWV2 fn3
ig
I-set
NM_175613 NP_783302   fn3
ig
I-set
V-set

Related Sequences

 
mRNAGenPeptSwissProt
BC026119 AAH26119 Q8IWV2
AY090737 AAM00025 Q8IWV2
AF464063 AAN86141 Q8IWV2
AF549455 AAP05786 Q8IWV2
AK314396 BAG37020 Q8IWV2
AK057278 BAG51896 B3KQ34
AK095729 BAG53116 B3KTK4
AK097633 BAG53498 B3KUN6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CNTN4 NP_001193884 M.musculus Cntn4 269784 Gene Info NP_001103219 95
R.norvegicus Cntn4 116658   NP_446331 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)