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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ASPSCR1, alveolar soft part sarcoma chromosome region, candidate 1
Sequence ID:NM_001251888
NM_024083
NR_045351
RefSeqGene ID:NG_030375
Entrez Gene ID:79058
Ensembl ID:ENSG00000169696

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 79935500 - 79975282


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3357489Full LengthBC006152alveolar soft part sarcoma chromosome region, candidate 1
4640076Full LengthBC018722alveolar soft part sarcoma chromosome region, candidate 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_076988  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001251888 NP_001238817    
NM_024083 NP_076988 Q9BZE9 UBX

Related Sequences

 
mRNAGenPeptSwissProt
BC006152 AAH06152 Q9BZE9
BC018722 AAH18722 Q9BZE9
AF324219 AAK08959 Q9BZE9
DQ892522 ABM83448  
DQ895734 ABM86660  
AK057403 BAB71472 Q9BZE9
AK057851 BAB71595 Q9BZE9
AK290624 BAF83313 Q9BZE9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ASPSCR1 NP_076988 M.musculus Aspscr1 68938 Gene Info NP_081153 82
R.norvegicus Aspscr1 691026   XP_001076577 77
A.gambiae AgaP_AGAP000394 1271854   XP_310708 39
N.crassa NCU03303 3880629   XP_964480 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)