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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SLBP, stem-loop binding protein
Sequence ID:NM_006527
Entrez Gene ID:7884
Ensembl ID:ENSG00000163950

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4p16.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 1694526 - 1714045

NM_006527 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1993216945261695439
93399916965001696566
1000114916979281698077
1150128717012901701427
1288134717017371701796
1348145217053221705426
1453156917136001713716
1570174317138561714029

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3907984Full LengthBC015703stem-loop binding protein
3908584Full LengthBC014908stem-loop binding protein

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006527 NP_006518 Q53XR2
Q14493
 

Related Sequences

 
mRNAGenPeptSwissProt
U75679 AAB97091 Q53XR2
Q14493
BC014908 AAH14908 Q53XR2
Q14493
BC015703 AAH15703 Q53XR2
Q14493
BT007433 AAP36101 Q53XR2
Q14493
DQ892370 ABM83296  
DQ895579 ABM86505  
AK315635 BAG38003 Q53XR2
AK091735 BAG52407 Q14493
AK093314 BAG52687 B3KSC5
AK094257 BAG52851 B3KST9
AK300826 BAG62479 B4DUW7
Z71188 CAA94918 Q53XR2
Q14493

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLBP NP_006518 M.musculus Slbp 20492 Gene Info NP_033219 89
R.norvegicus Slbp 681062   NP_001124460 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)