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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ATP5A1, ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
Sequence ID:NM_001001935
NM_001001937
NM_001257334
NM_001257335
NM_004046
Entrez Gene ID:498
Ensembl ID:ENSG00000152234

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 43664115 - 43678261

 Exon Info From UCSC:
NM_001001937
NM_004046

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2823663Full LengthBC019310ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
3867375Full LengthBC011384ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
3873390Full LengthBC039135ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
4646761Full LengthBC016046ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
5491013Full LengthBC067385ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
5582043Full LengthBC064562ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
3351710IncompleteBC007299ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
3356657IncompleteBC003119ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
3608797IncompleteBC008028ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001001937  NP_004037  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001001935 NP_001001935    
NM_001001937 NP_001001937 P25705 ATP-synt_ab
ATP-synt_ab_C
ATP-synt_ab_N
NM_001257334 NP_001244263    
NM_001257335 NP_001244264    
NM_004046 NP_004037 P25705 ATP-synt_ab
ATP-synt_ab_C
ATP-synt_ab_N

Related Sequences

 
mRNAGenPeptSwissProt
BC003119 AAH03119 P25705
BC007299 AAH07299 P25705
BC008028 AAH08028 P25705
BC011384 AAH11384 P25705
BC016046 AAH16046 P25705
BC019310 AAH19310 P25705
BC039135 AAH39135 P25705
BC064562 AAH64562 P25705
BC067385 AAH67385 P25705
BT007209 AAP35873 P25705
BT008250 AAP36942  
DQ894210 ABM85136  
DQ890557 ABM92174  
D14710 BAA03531 P25705
AK289457 BAF82146 A8K092
AK092735 BAG52604 A8K092
AK294804 BAG57924 B4DGW3
AK302272 BAG63618 B4DY56
X59066 CAA41789 P25705
X65460 CAA46452 P25705

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP5A1 NP_001001937 M.musculus Atp5a1 11946 Gene Info NP_031531 98
R.norvegicus Atp5a1 65262   NP_075581 97
A.gambiae AgaP_AGAP005134 1274812   XP_314018 84
C.elegans H28O16.1 173134   NP_001021526 84
D.melanogaster blw 37617   NP_726243 82
S.pombe atp1 2541526   NP_594919 72
S.cerevisiae ATP1 852177   NP_009453 71
A.thaliana atp1 3890462   NP_085571 70
A.thaliana AT2G07698 815374   NP_178788 69
N.crassa NCU02514 3881843   XP_965645 69
P.falciparum PFB0795w 812757   XP_001349675 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta