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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CMTM3, CKLF-like MARVEL transmembrane domain containing 3
Sequence ID:NM_144601
NM_181553
NR_037613
NR_037619
NM_001048251
NM_181554
NM_181555
Entrez Gene ID:123920
Ensembl ID:ENSG00000140931

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 66638253 - 66647795

 Exon Info From UCSC:
NM_144601
NM_181553
NM_001048251
NM_181554

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3960441Full LengthBC023509CKLF-like MARVEL transmembrane domain containing 3
4638047Full LengthBC023591CKLF-like MARVEL transmembrane domain containing 3
5187826Full LengthBC040227CKLF-like MARVEL transmembrane domain containing 3
5271808Full LengthBC036042CKLF-like MARVEL transmembrane domain containing 3
5770132Full LengthBC047701CKLF-like MARVEL transmembrane domain containing 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_653202  NP_853531  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_144601 NP_653202 Q96MX0 MARVEL
NM_181553 NP_853531 Q96MX0 MARVEL

Related Sequences

 
mRNAGenPeptSwissProt
BC023509 AAH23509 Q96MX0
BC023591 AAH23591 Q96MX0
BC036042 AAH36042 Q96MX0
BC040227 AAH40227 Q96MX0
BC047701 AAH47701 Q96MX0
AF479813 AAN73435 Q96MX0
AY166714 AAN75573 Q96MX0
AK056324 BAB71150 Q96MX0
AK075075 BAG52060 B3KQJ8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CMTM3 NP_853531 M.musculus Cmtm3 68119 Gene Info NP_077179 88
R.norvegicus Cmtm3 291813   NP_001099634 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)