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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. AQP5, aquaporin 5
Sequence ID:NM_001651
Entrez Gene ID:362
Ensembl ID:ENSG00000161798

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 50355733 - 50359461

NM_001651 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18855035527850356162
88610505035727450357438
105111345035787450357957
113518215035877450359460

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5269384Full LengthBC032946aquaporin 5
4755120IncompleteBC034356aquaporin 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001642  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001651 NP_001642 P55064 MIP

Related Sequences

 
mRNAGenPeptSwissProt
BC032946 AAH32946 P55064
DQ891223 ABM82149  
DQ894406 ABM85332  
CR541989 CAG46786 P55064
CR542022 CAG46819 P55064

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AQP5 NP_001642 R.norvegicus Aqp5 25241   NP_036911 92
M.musculus Aqp5 11830 Gene Info NP_033831 91
A.thaliana DELTA-TIP 820870   NP_188245 43
N.crassa NCU08052 3881348   XP_965183 42
S.cerevisiae AQY1 856322   NP_015518 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)