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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLIT2, slit homolog 2 (Drosophila)
Sequence ID:NM_004787
Entrez Gene ID:9353
Ensembl ID:ENSG00000145147

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4p15.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 20255234 - 20620788

 Exon Info From UCSC:
NM_004787

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9052496Full LengthBC143978slit homolog 2 (Drosophila)
40125741Full LengthBC117190slit homolog 2 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004778  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004787 NP_004778 O94813 EGF
LRR_1
LRRNT
LRRCT
Laminin_G_2

Related Sequences

 
mRNAGenPeptSwissProt
AF055585 AAD04309 O94813
AF133270 AAD25539 O94813
BC117190 AAI17191 O94813
BC143978 AAI43979 O94813
AB017168 BAA35185 O94813
AK027326 BAG51304 B3KNE2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLIT2 NP_004778 M.musculus Slit2 20563 Gene Info NP_848919 97
R.norvegicus Slit2 360272   NP_072154 97
A.gambiae AgaP_AGAP002793 1273169   XP_312121 48
D.melanogaster sli 36746   NP_476727 47
C.elegans slt-1 181562   NP_510437 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)